Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Gm24543-201ENSMUST00000103867 82 ntBASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Gm38225-201ENSMUST00000194001 393 ntBASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1fQ9JIS7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.34■□□□□ 0.37
Cacna1fQ9JIS7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Cacna1fQ9JIS7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cacna1fQ9JIS7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1fQ9JIS7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.33■□□□□ 0.37
Cacna1fQ9JIS7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1fQ9JIS7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.33■□□□□ 0.37
Cacna1fQ9JIS7 Gm5186-201ENSMUST00000218781 920 ntBASIC17.33■□□□□ 0.37
Cacna1fQ9JIS7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Cacna1fQ9JIS7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1fQ9JIS7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1fQ9JIS7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Gm22189-201ENSMUST00000103822 86 ntBASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Celf4-206ENSMUST00000224553 1729 ntBASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1fQ9JIS7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Mir8102-201ENSMUST00000184148 139 ntBASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1fQ9JIS7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Gm27437-201ENSMUST00000183429 107 ntBASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1fQ9JIS7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms