Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smco4Q9JIS3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smco4Q9JIS3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smco4Q9JIS3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms