Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Gm9229-201ENSMUST00000222777 126 ntBASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upf1Q9EPU0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upf1Q9EPU0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upf1Q9EPU0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Upf1Q9EPU0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upf1Q9EPU0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.33■□□□□ 0.37
Upf1Q9EPU0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upf1Q9EPU0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Upf1Q9EPU0 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.33■□□□□ 0.36
Upf1Q9EPU0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Gm5354-201ENSMUST00000182417 973 ntBASIC17.33■□□□□ 0.36
Upf1Q9EPU0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upf1Q9EPU0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Gm14723-201ENSMUST00000118686 215 ntBASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Gm12176-201ENSMUST00000121420 875 ntBASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Gm27486-201ENSMUST00000184923 80 ntBASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Mir7654-201ENSMUST00000185082 70 ntBASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.32■□□□□ 0.36
Upf1Q9EPU0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.32■□□□□ 0.36
Upf1Q9EPU0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upf1Q9EPU0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upf1Q9EPU0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Gm14722-201ENSMUST00000118943 689 ntBASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upf1Q9EPU0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms