Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Mir449b-201ENSMUST00000104833 80 ntBASIC15.06■□□□□ 0
Rrp8Q9DB85 Gm13216-201ENSMUST00000117145 591 ntBASIC15.06■□□□□ 0
Rrp8Q9DB85 Gm9385-201ENSMUST00000117563 472 ntBASIC15.06■□□□□ 0
Rrp8Q9DB85 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Gm22175-201ENSMUST00000175007 78 ntBASIC15.06■□□□□ 0
Rrp8Q9DB85 Gm7774-201ENSMUST00000200064 533 ntBASIC15.06■□□□□ 0
Rrp8Q9DB85 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rrp8Q9DB85 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rrp8Q9DB85 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.06■□□□□ 0
Rrp8Q9DB85 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rrp8Q9DB85 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rrp8Q9DB85 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rrp8Q9DB85 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rrp8Q9DB85 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rrp8Q9DB85 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rrp8Q9DB85 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rrp8Q9DB85 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Rrp8Q9DB85 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.05■□□□□ -0
Rrp8Q9DB85 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Gm16198-201ENSMUST00000118766 670 ntBASIC15.05■□□□□ -0
Rrp8Q9DB85 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.05■□□□□ -0
Rrp8Q9DB85 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.05■□□□□ -0
Rrp8Q9DB85 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.05■□□□□ -0
Rrp8Q9DB85 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Rrp8Q9DB85 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Rrp8Q9DB85 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Rrp8Q9DB85 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.05■□□□□ -0
Rrp8Q9DB85 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.05■□□□□ -0
Rrp8Q9DB85 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rrp8Q9DB85 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.04■□□□□ -0
Rrp8Q9DB85 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.04■□□□□ -0
Rrp8Q9DB85 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Gm24158-201ENSMUST00000175263 71 ntBASIC15.04■□□□□ -0
Rrp8Q9DB85 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Gm2272-201ENSMUST00000194903 582 ntBASIC15.04■□□□□ -0
Rrp8Q9DB85 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Gm18057-201ENSMUST00000208220 503 ntBASIC15.04■□□□□ -0
Rrp8Q9DB85 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.04■□□□□ -0
Rrp8Q9DB85 Gm10154-201ENSMUST00000084445 354 ntBASIC15.04■□□□□ -0
Rrp8Q9DB85 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Rrp8Q9DB85 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rrp8Q9DB85 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms