Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4bQ9D8B3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.39■□□□□ 0.7
Chmp4bQ9D8B3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chmp4bQ9D8B3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chmp4bQ9D8B3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chmp4bQ9D8B3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Chmp4bQ9D8B3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Gm11780-201ENSMUST00000136880 516 ntBASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Gm43347-201ENSMUST00000200226 580 ntBASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chmp4bQ9D8B3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4bQ9D8B3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Gm27459-201ENSMUST00000184860 107 ntBASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Gm6296-201ENSMUST00000222599 943 ntBASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.36■□□□□ 0.69
Chmp4bQ9D8B3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms