Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Gm10013-201ENSMUST00000106074 672 ntBASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp5Q9D7S9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp5Q9D7S9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp5Q9D7S9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp5Q9D7S9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.67
Chmp5Q9D7S9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp5Q9D7S9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp5Q9D7S9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Chmp5Q9D7S9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp5Q9D7S9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp5Q9D7S9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Gm6345-202ENSMUST00000180900 204 ntBASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp5Q9D7S9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms