Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.93■□□□□ 0.3
Cfap53Q9D439 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.93■□□□□ 0.3
Cfap53Q9D439 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Gm43347-201ENSMUST00000200226 580 ntBASIC16.93■□□□□ 0.3
Cfap53Q9D439 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Gm10819-201ENSMUST00000099988 561 ntBASIC16.93■□□□□ 0.3
Cfap53Q9D439 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cfap53Q9D439 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cfap53Q9D439 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cfap53Q9D439 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cfap53Q9D439 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.89■□□□□ 0.3
Cfap53Q9D439 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap53Q9D439 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap53Q9D439 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap53Q9D439 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.89■□□□□ 0.29
Cfap53Q9D439 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Cfap53Q9D439 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap53Q9D439 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms