Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Grk6-207ENSMUST00000225925 2769 ntBASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf135Q9CWS1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Gm11452-201ENSMUST00000122376 690 ntBASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf135Q9CWS1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf135Q9CWS1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Gm18733-201ENSMUST00000173950 856 ntBASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Gm44454-201ENSMUST00000198541 138 ntBASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Gm18195-201ENSMUST00000207604 706 ntBASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf135Q9CWS1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms