Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.15■□□□□ 0.5
Smc3Q9CW03 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc3Q9CW03 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.14■□□□□ 0.5
Smc3Q9CW03 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Smc3Q9CW03 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Gm9172-201ENSMUST00000212092 954 ntBASIC18.14■□□□□ 0.49
Smc3Q9CW03 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc3Q9CW03 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smc3Q9CW03 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Gm27742-201ENSMUST00000184667 60 ntBASIC18.13■□□□□ 0.49
Smc3Q9CW03 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.13■□□□□ 0.49
Smc3Q9CW03 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smc3Q9CW03 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.12■□□□□ 0.49
Smc3Q9CW03 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms