Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Smc1aQ9CU62 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smc1aQ9CU62 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Gm12350-201ENSMUST00000121208 462 ntBASIC17.23■□□□□ 0.35
Smc1aQ9CU62 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc1aQ9CU62 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Gm8000-201ENSMUST00000188378 592 ntBASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc1aQ9CU62 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.21■□□□□ 0.35
Smc1aQ9CU62 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc1aQ9CU62 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc1aQ9CU62 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc1aQ9CU62 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms