Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cldnd1Q9CQX5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cldnd1Q9CQX5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cldnd1Q9CQX5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.73■□□□□ 0.11
Cldnd1Q9CQX5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cldnd1Q9CQX5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Gm9794-201ENSMUST00000202370 423 ntBASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Gm18049-201ENSMUST00000208909 581 ntBASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldnd1Q9CQX5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Gm14719-201ENSMUST00000121891 340 ntBASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Gm16026-204ENSMUST00000162652 683 ntBASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Gm29541-201ENSMUST00000191351 678 ntBASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldnd1Q9CQX5 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.71■□□□□ 0.1
Cldnd1Q9CQX5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cldnd1Q9CQX5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cldnd1Q9CQX5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Cldnd1Q9CQX5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Gm15483-201ENSMUST00000120338 456 ntBASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Gm14767-201ENSMUST00000121559 586 ntBASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Gm15487-201ENSMUST00000122373 465 ntBASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldnd1Q9CQX5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Gm13015-201ENSMUST00000118674 204 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms