Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RTRAFQ9CQE8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
RTRAFQ9CQE8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.58□□□□□ -0.39
RTRAFQ9CQE8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTRAFQ9CQE8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RTRAFQ9CQE8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms