Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim33Q99PP7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.31■□□□□ 0.04
Trim33Q99PP7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.31■□□□□ 0.04
Trim33Q99PP7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim33Q99PP7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim33Q99PP7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim33Q99PP7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim33Q99PP7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.29■□□□□ 0.04
Trim33Q99PP7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim33Q99PP7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Gm27741-201ENSMUST00000185060 237 ntBASIC15.28■□□□□ 0.04
Trim33Q99PP7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim33Q99PP7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim33Q99PP7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms