Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tlr3Q99MB1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.53■□□□□ 0.24
Tlr3Q99MB1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tlr3Q99MB1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Gm8000-201ENSMUST00000188378 592 ntBASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tlr3Q99MB1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.52■□□□□ 0.23
Tlr3Q99MB1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.52■□□□□ 0.23
Tlr3Q99MB1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tlr3Q99MB1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tlr3Q99MB1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tlr3Q99MB1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.52■□□□□ 0.23
Tlr3Q99MB1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tlr3Q99MB1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.52■□□□□ 0.23
Tlr3Q99MB1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tlr3Q99MB1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Gm25990-201ENSMUST00000102440 86 ntBASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Gm6089-201ENSMUST00000197666 938 ntBASIC16.51■□□□□ 0.23
Tlr3Q99MB1 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tlr3Q99MB1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tlr3Q99MB1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms