Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Gm15372-201ENSMUST00000120729 834 ntBASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf3Q99LI7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Gm12497-201ENSMUST00000138778 237 ntBASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Gm25745-201ENSMUST00000174945 133 ntBASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.92□□□□□ -0.02
Cstf3Q99LI7 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cstf3Q99LI7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf3Q99LI7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf3Q99LI7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms