Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha11Q91Y19 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Gm8318-201ENSMUST00000182954 872 ntBASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Gm8000-201ENSMUST00000188378 592 ntBASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Prob1-201ENSMUST00000097619 3021 ntBASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha11Q91Y19 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Gm9727-201ENSMUST00000161387 555 ntBASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha11Q91Y19 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha11Q91Y19 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms