Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Gm19164-201ENSMUST00000210667 640 ntBASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdha3Q91Y16 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Gm7222-201ENSMUST00000117512 906 ntBASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdha3Q91Y16 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha3Q91Y16 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha3Q91Y16 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcdha3Q91Y16 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha3Q91Y16 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcdha3Q91Y16 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha3Q91Y16 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha3Q91Y16 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha3Q91Y16 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha3Q91Y16 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha3Q91Y16 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha3Q91Y16 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha3Q91Y16 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha3Q91Y16 Gm15173-201ENSMUST00000122049 433 ntBASIC16.08■□□□□ 0.16
Pcdha3Q91Y16 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdha3Q91Y16 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdha3Q91Y16 Gm2651-201ENSMUST00000203560 838 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms