Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Gm15590-201ENSMUST00000078419 552 ntBASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdha9Q91Y11 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Gm45167-201ENSMUST00000208007 322 ntBASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdha9Q91Y11 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha9Q91Y11 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha9Q91Y11 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.33■□□□□ 0.21
Pcdha9Q91Y11 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdha9Q91Y11 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdha9Q91Y11 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdha9Q91Y11 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms