Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vsx1Q91V10 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.22■□□□□ 0.03
Vsx1Q91V10 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vsx1Q91V10 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.22■□□□□ 0.03
Vsx1Q91V10 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Thap2-203ENSMUST00000218989 527 ntBASIC15.22■□□□□ 0.03
Vsx1Q91V10 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.22■□□□□ 0.03
Vsx1Q91V10 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.22■□□□□ 0.03
Vsx1Q91V10 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vsx1Q91V10 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.21■□□□□ 0.03
Vsx1Q91V10 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.21■□□□□ 0.03
Vsx1Q91V10 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.21■□□□□ 0.03
Vsx1Q91V10 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Vsx1Q91V10 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Vsx1Q91V10 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vsx1Q91V10 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vsx1Q91V10 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
Vsx1Q91V10 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.2■□□□□ 0.02
Vsx1Q91V10 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Gm5866-201ENSMUST00000177881 973 ntBASIC15.2■□□□□ 0.02
Vsx1Q91V10 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.2■□□□□ 0.02
Vsx1Q91V10 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vsx1Q91V10 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.2■□□□□ 0.02
Vsx1Q91V10 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vsx1Q91V10 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vsx1Q91V10 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vsx1Q91V10 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Vsx1Q91V10 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vsx1Q91V10 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.19■□□□□ 0.02
Vsx1Q91V10 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vsx1Q91V10 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vsx1Q91V10 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vsx1Q91V10 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms