Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
Rpa1Q8VEE4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Efs-202ENSMUST00000227037 2540 ntBASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Gm16061-201ENSMUST00000122167 857 ntBASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Gm37055-201ENSMUST00000191866 133 ntBASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Gm5417-201ENSMUST00000079706 384 ntBASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpa1Q8VEE4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Gm10252-201ENSMUST00000209541 832 ntBASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpa1Q8VEE4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Gm2274-201ENSMUST00000184539 609 ntBASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpa1Q8VEE4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms