Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Gm25745-201ENSMUST00000174945 133 ntBASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Gm4535-201ENSMUST00000182274 558 ntBASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Gm10355-201ENSMUST00000097146 517 ntBASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkd2Q8VE28 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.08□□□□□ -0.16
Nkd2Q8VE28 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.07□□□□□ -0.16
Nkd2Q8VE28 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Gm7230-201ENSMUST00000173026 815 ntBASIC14.07□□□□□ -0.16
Nkd2Q8VE28 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.07□□□□□ -0.16
Nkd2Q8VE28 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Nkd2Q8VE28 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Gm25990-201ENSMUST00000102440 86 ntBASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Gm5364-201ENSMUST00000216789 889 ntBASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkd2Q8VE28 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkd2Q8VE28 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkd2Q8VE28 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms