Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Gm11764-201ENSMUST00000120221 623 ntBASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Gm6443-201ENSMUST00000203599 874 ntBASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.86■□□□□ 0.13
Rprd1aQ8VDS4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Gm27628-201ENSMUST00000184911 107 ntBASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Gm18206-201ENSMUST00000207027 926 ntBASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rprd1aQ8VDS4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Gm1401-201ENSMUST00000122048 772 ntBASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rprd1aQ8VDS4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.83■□□□□ 0.13
Rprd1aQ8VDS4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rprd1aQ8VDS4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Rprd1aQ8VDS4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rprd1aQ8VDS4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rprd1aQ8VDS4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.83■□□□□ 0.13
Rprd1aQ8VDS4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rprd1aQ8VDS4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rprd1aQ8VDS4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms