Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf8Q8VC56 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf8Q8VC56 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf8Q8VC56 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf8Q8VC56 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Olfr129-201ENSMUST00000122318 993 ntBASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.9□□□□□ -0.02
Rnf8Q8VC56 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.9□□□□□ -0.02
Rnf8Q8VC56 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf8Q8VC56 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf8Q8VC56 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.88□□□□□ -0.03
Rnf8Q8VC56 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf8Q8VC56 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Gm10819-201ENSMUST00000099988 561 ntBASIC14.87□□□□□ -0.03
Rnf8Q8VC56 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms