Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.46■□□□□ 0.54
Top1mtQ8R4U6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Top1mtQ8R4U6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Top1mtQ8R4U6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Sybu-209ENSMUST00000228639 4113 ntBASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Top1mtQ8R4U6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Top1mtQ8R4U6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Gm25990-201ENSMUST00000102440 86 ntBASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Gm6089-201ENSMUST00000197666 938 ntBASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms