Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cd109Q8R422 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cd109Q8R422 Gm13015-201ENSMUST00000118674 204 ntBASIC21.71■■□□□ 1.07
Cd109Q8R422 Gm11543-201ENSMUST00000120758 370 ntBASIC21.71■■□□□ 1.07
Cd109Q8R422 Rbfox2-208ENSMUST00000227930 1218 ntBASIC21.71■■□□□ 1.07
Cd109Q8R422 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cd109Q8R422 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cd109Q8R422 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC21.71■■□□□ 1.07
Cd109Q8R422 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cd109Q8R422 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cd109Q8R422 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC21.7■■□□□ 1.06
Cd109Q8R422 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC21.7■■□□□ 1.06
Cd109Q8R422 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC21.7■■□□□ 1.06
Cd109Q8R422 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Cd109Q8R422 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC21.7■■□□□ 1.06
Cd109Q8R422 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cd109Q8R422 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cd109Q8R422 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cd109Q8R422 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cd109Q8R422 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Cd109Q8R422 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC21.7■■□□□ 1.06
Cd109Q8R422 Gm38294-201ENSMUST00000192831 381 ntBASIC21.7■■□□□ 1.06
Cd109Q8R422 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC21.7■■□□□ 1.06
Cd109Q8R422 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC21.7■■□□□ 1.06
Cd109Q8R422 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cd109Q8R422 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cd109Q8R422 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cd109Q8R422 Gm42934-201ENSMUST00000196920 1345 ntBASIC21.7■■□□□ 1.06
Cd109Q8R422 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cd109Q8R422 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cd109Q8R422 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 AC131743.5-201ENSMUST00000220775 1618 ntBASIC21.69■■□□□ 1.06
Cd109Q8R422 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 Gm14026-201ENSMUST00000120625 1789 ntBASIC21.69■■□□□ 1.06
Cd109Q8R422 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cd109Q8R422 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Cd109Q8R422 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC21.69■■□□□ 1.06
Cd109Q8R422 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Cd109Q8R422 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC21.69■■□□□ 1.06
Cd109Q8R422 Gm27618-201ENSMUST00000183671 60 ntBASIC21.69■■□□□ 1.06
Cd109Q8R422 Gm27920-201ENSMUST00000183953 96 ntBASIC21.69■■□□□ 1.06
Cd109Q8R422 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC21.69■■□□□ 1.06
Cd109Q8R422 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC21.69■■□□□ 1.06
Cd109Q8R422 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cd109Q8R422 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Cd109Q8R422 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cd109Q8R422 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Cd109Q8R422 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.68■■□□□ 1.06
Cd109Q8R422 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC21.68■■□□□ 1.06
Cd109Q8R422 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Cd109Q8R422 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC21.68■■□□□ 1.06
Cd109Q8R422 Gm6415-201ENSMUST00000118488 348 ntBASIC21.68■■□□□ 1.06
Cd109Q8R422 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Gm9824-201ENSMUST00000178707 561 ntBASIC21.68■■□□□ 1.06
Cd109Q8R422 Klk2-ps-201ENSMUST00000205342 571 ntBASIC21.68■■□□□ 1.06
Cd109Q8R422 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Cd109Q8R422 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 AC069562.2-201ENSMUST00000224644 2146 ntBASIC21.68■■□□□ 1.06
Cd109Q8R422 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cd109Q8R422 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd109Q8R422 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Cd109Q8R422 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cd109Q8R422 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd109Q8R422 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cd109Q8R422 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cd109Q8R422 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC21.67■■□□□ 1.06
Cd109Q8R422 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd109Q8R422 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cd109Q8R422 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Cd109Q8R422 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Cd109Q8R422 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cd109Q8R422 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cd109Q8R422 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cd109Q8R422 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC21.66■■□□□ 1.06
Cd109Q8R422 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21.66■■□□□ 1.06
Cd109Q8R422 Gm15593-201ENSMUST00000122085 1008 ntBASIC21.66■■□□□ 1.06
Cd109Q8R422 Gm43767-201ENSMUST00000198933 381 ntBASIC21.66■■□□□ 1.06
Cd109Q8R422 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC21.66■■□□□ 1.06
Cd109Q8R422 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cd109Q8R422 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms