Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Gm13597-201ENSMUST00000121239 375 ntBASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpp40Q8R1F9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Gm15467-201ENSMUST00000120582 445 ntBASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Gm8000-201ENSMUST00000188378 592 ntBASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Gm18246-201ENSMUST00000221023 728 ntBASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpp40Q8R1F9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Gm5264-201ENSMUST00000190584 848 ntBASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rpp40Q8R1F9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpp40Q8R1F9 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Gm14494-201ENSMUST00000118786 435 ntBASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.46■□□□□ 0.23
Rpp40Q8R1F9 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms