Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Gm8318-201ENSMUST00000182954 872 ntBASIC18.2■□□□□ 0.5
Atf7Q8R0S1 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atf7Q8R0S1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Gm25990-201ENSMUST00000102440 86 ntBASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Gm6089-201ENSMUST00000197666 938 ntBASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atf7Q8R0S1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf7Q8R0S1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Rps4l-201ENSMUST00000071745 943 ntBASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.17■□□□□ 0.5
Atf7Q8R0S1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.16■□□□□ 0.5
Atf7Q8R0S1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Atf7Q8R0S1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Atf7Q8R0S1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Atf7Q8R0S1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf7Q8R0S1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf7Q8R0S1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Atf7Q8R0S1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf7Q8R0S1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf7Q8R0S1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms