Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Gm18018-201ENSMUST00000198273 408 ntBASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Gm43630-201ENSMUST00000201550 776 ntBASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx54Q8K4L0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx54Q8K4L0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx54Q8K4L0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx54Q8K4L0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.07■□□□□ 0.8
Ddx54Q8K4L0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Gm15824-201ENSMUST00000119516 955 ntBASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx54Q8K4L0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Gm9115-201ENSMUST00000120192 1348 ntBASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 AC238811.1-201ENSMUST00000225302 441 ntBASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx54Q8K4L0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Asic1-205ENSMUST00000228185 1818 ntBASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx54Q8K4L0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Gm14042-201ENSMUST00000120139 833 ntBASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Gm6266-201ENSMUST00000203844 806 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms