Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Gm7367-201ENSMUST00000057611 492 ntBASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.09□□□□□ -0.15
Ebf4Q8K4J2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ebf4Q8K4J2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ebf4Q8K4J2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Ebf4Q8K4J2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ebf4Q8K4J2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ebf4Q8K4J2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Gm5643-201ENSMUST00000117081 966 ntBASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ebf4Q8K4J2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf4Q8K4J2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms