Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfwd3Q8CIK8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfwd3Q8CIK8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Gm13884-201ENSMUST00000118103 829 ntBASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Gm13418-201ENSMUST00000119097 944 ntBASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Gm8344-201ENSMUST00000119813 856 ntBASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfwd3Q8CIK8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Gm25990-201ENSMUST00000102440 86 ntBASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Gm7862-201ENSMUST00000121461 292 ntBASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfwd3Q8CIK8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Gm11452-201ENSMUST00000122376 690 ntBASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Gm19164-201ENSMUST00000210667 640 ntBASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms