Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps50Q8CI71 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps50Q8CI71 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps50Q8CI71 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps50Q8CI71 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps50Q8CI71 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps50Q8CI71 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.19■□□□□ 0.02
Vps50Q8CI71 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Vps50Q8CI71 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps50Q8CI71 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps50Q8CI71 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps50Q8CI71 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Mir8098-201ENSMUST00000184011 137 ntBASIC15.18■□□□□ 0.02
Vps50Q8CI71 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps50Q8CI71 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vps50Q8CI71 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Gm27459-201ENSMUST00000184860 107 ntBASIC15.17■□□□□ 0.02
Vps50Q8CI71 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vps50Q8CI71 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.16■□□□□ 0.02
Vps50Q8CI71 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.16■□□□□ 0.02
Vps50Q8CI71 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Gm44454-201ENSMUST00000198541 138 ntBASIC15.16■□□□□ 0.02
Vps50Q8CI71 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Gm7461-201ENSMUST00000058918 827 ntBASIC15.16■□□□□ 0.02
Vps50Q8CI71 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps50Q8CI71 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.16■□□□□ 0.02
Vps50Q8CI71 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms