Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rp1l1Q8CGM2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Gm9522-201ENSMUST00000182394 926 ntBASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 AY702102-202ENSMUST00000194651 1173 ntBASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rp1l1Q8CGM2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Gm8602-201ENSMUST00000184045 607 ntBASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Gm15653-201ENSMUST00000119247 907 ntBASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.8■□□□□ 0.12
Rp1l1Q8CGM2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.79■□□□□ 0.12
Rp1l1Q8CGM2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Gm43630-201ENSMUST00000201550 776 ntBASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Gm6266-201ENSMUST00000203844 806 ntBASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Gm20445-201ENSMUST00000061905 565 ntBASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.78■□□□□ 0.12
Rp1l1Q8CGM2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms