Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Gm8318-201ENSMUST00000182954 872 ntBASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf1Q8CFK2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf1Q8CFK2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Mir5131-201ENSMUST00000175426 93 ntBASIC18.59■□□□□ 0.57
Brf1Q8CFK2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 BC037039-201ENSMUST00000192003 2205 ntBASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Brf1Q8CFK2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
Brf1Q8CFK2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Brf1Q8CFK2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Brf1Q8CFK2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Brf1Q8CFK2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Brf1Q8CFK2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Gm37153-201ENSMUST00000193637 231 ntBASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Mzt1-203ENSMUST00000227948 952 ntBASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Brf1Q8CFK2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brf1Q8CFK2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms