Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc28aQ8CEI3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc28aQ8CEI3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc28aQ8CEI3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc28aQ8CEI3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Ccdc28aQ8CEI3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms