Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc28bQ8CEG5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.26■□□□□ 0.03
Ccdc28bQ8CEG5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.25■□□□□ 0.03
Ccdc28bQ8CEG5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc28bQ8CEG5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Efs-202ENSMUST00000227037 2540 ntBASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms