Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim9Q8C7M3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Gm3928-201ENSMUST00000121141 1307 ntBASIC17■□□□□ 0.31
Trim9Q8C7M3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17■□□□□ 0.31
Trim9Q8C7M3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Gm7153-201ENSMUST00000117092 455 ntBASIC17■□□□□ 0.31
Trim9Q8C7M3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17■□□□□ 0.31
Trim9Q8C7M3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17■□□□□ 0.31
Trim9Q8C7M3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Gm43352-201ENSMUST00000196419 3065 ntBASIC17■□□□□ 0.31
Trim9Q8C7M3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim9Q8C7M3 Gm10584-201ENSMUST00000207036 2628 ntBASIC17■□□□□ 0.31
Trim9Q8C7M3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Gm6376-201ENSMUST00000209407 580 ntBASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim9Q8C7M3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.98■□□□□ 0.31
Trim9Q8C7M3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim9Q8C7M3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms