Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Eri3Q8C460 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Eri3Q8C460 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Eri3Q8C460 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Eri3Q8C460 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Eri3Q8C460 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Eri3Q8C460 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Eri3Q8C460 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Eri3Q8C460 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Eri3Q8C460 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.66□□□□□ -0.06
Eri3Q8C460 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.66□□□□□ -0.06
Eri3Q8C460 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Eri3Q8C460 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Eri3Q8C460 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Eri3Q8C460 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Eri3Q8C460 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.66□□□□□ -0.06
Eri3Q8C460 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.66□□□□□ -0.06
Eri3Q8C460 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.66□□□□□ -0.06
Eri3Q8C460 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Eri3Q8C460 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.66□□□□□ -0.06
Eri3Q8C460 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.66□□□□□ -0.06
Eri3Q8C460 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Eri3Q8C460 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.65□□□□□ -0.06
Eri3Q8C460 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.65□□□□□ -0.06
Eri3Q8C460 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.65□□□□□ -0.06
Eri3Q8C460 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.65□□□□□ -0.06
Eri3Q8C460 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.65□□□□□ -0.06
Eri3Q8C460 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.65□□□□□ -0.06
Eri3Q8C460 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.65□□□□□ -0.06
Eri3Q8C460 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Eri3Q8C460 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Eri3Q8C460 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Eri3Q8C460 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.64□□□□□ -0.07
Eri3Q8C460 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.64□□□□□ -0.07
Eri3Q8C460 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Gm14722-201ENSMUST00000118943 689 ntBASIC14.64□□□□□ -0.07
Eri3Q8C460 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.64□□□□□ -0.07
Eri3Q8C460 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Eri3Q8C460 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Gm7230-201ENSMUST00000173026 815 ntBASIC14.64□□□□□ -0.07
Eri3Q8C460 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Eri3Q8C460 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.64□□□□□ -0.07
Eri3Q8C460 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Eri3Q8C460 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.64□□□□□ -0.07
Eri3Q8C460 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Eri3Q8C460 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms