Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Usp44Q8C2S0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp44Q8C2S0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Gm45212-201ENSMUST00000205831 3403 ntBASIC18■□□□□ 0.47
Usp44Q8C2S0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Gm8242-201ENSMUST00000193029 1420 ntBASIC18■□□□□ 0.47
Usp44Q8C2S0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18■□□□□ 0.47
Usp44Q8C2S0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Usp44Q8C2S0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Usp44Q8C2S0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18■□□□□ 0.47
Usp44Q8C2S0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18■□□□□ 0.47
Usp44Q8C2S0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Usp44Q8C2S0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp44Q8C2S0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Celf4-206ENSMUST00000224553 1729 ntBASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Gm7787-201ENSMUST00000216858 688 ntBASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp44Q8C2S0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms