Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Gm12859-201ENSMUST00000117834 427 ntBASIC20.51■□□□□ 0.87
Cps1Q8C196 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC20.51■□□□□ 0.87
Cps1Q8C196 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cps1Q8C196 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
Cps1Q8C196 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.5■□□□□ 0.87
Cps1Q8C196 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.5■□□□□ 0.87
Cps1Q8C196 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC20.5■□□□□ 0.87
Cps1Q8C196 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Cps1Q8C196 AC238811.1-201ENSMUST00000225302 441 ntBASIC20.5■□□□□ 0.87
Cps1Q8C196 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC20.5■□□□□ 0.87
Cps1Q8C196 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Celf4-206ENSMUST00000224553 1729 ntBASIC20.5■□□□□ 0.87
Cps1Q8C196 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.5■□□□□ 0.87
Cps1Q8C196 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cps1Q8C196 AC164565.1-201ENSMUST00000217520 1484 ntBASIC20.5■□□□□ 0.87
Cps1Q8C196 Gm5320-201ENSMUST00000207163 1519 ntBASIC20.49■□□□□ 0.87
Cps1Q8C196 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cps1Q8C196 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cps1Q8C196 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC20.49■□□□□ 0.87
Cps1Q8C196 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cps1Q8C196 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cps1Q8C196 Gm15653-201ENSMUST00000119247 907 ntBASIC20.49■□□□□ 0.87
Cps1Q8C196 Gm3436-201ENSMUST00000179930 840 ntBASIC20.49■□□□□ 0.87
Cps1Q8C196 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cps1Q8C196 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC20.49■□□□□ 0.87
Cps1Q8C196 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC20.49■□□□□ 0.87
Cps1Q8C196 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cps1Q8C196 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cps1Q8C196 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cps1Q8C196 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cps1Q8C196 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cps1Q8C196 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cps1Q8C196 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Cps1Q8C196 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cps1Q8C196 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cps1Q8C196 Gm6756-201ENSMUST00000180647 1620 ntBASIC20.49■□□□□ 0.87
Cps1Q8C196 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.49■□□□□ 0.87
Cps1Q8C196 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cps1Q8C196 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cps1Q8C196 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cps1Q8C196 Gm6222-201ENSMUST00000120787 396 ntBASIC20.48■□□□□ 0.87
Cps1Q8C196 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC20.48■□□□□ 0.87
Cps1Q8C196 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cps1Q8C196 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Gm6218-201ENSMUST00000219812 628 ntBASIC20.48■□□□□ 0.87
Cps1Q8C196 Gm16476-201ENSMUST00000221544 139 ntBASIC20.48■□□□□ 0.87
Cps1Q8C196 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC20.48■□□□□ 0.87
Cps1Q8C196 Gm14042-201ENSMUST00000120139 833 ntBASIC20.48■□□□□ 0.87
Cps1Q8C196 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cps1Q8C196 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC20.48■□□□□ 0.87
Cps1Q8C196 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cps1Q8C196 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cps1Q8C196 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cps1Q8C196 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cps1Q8C196 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cps1Q8C196 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cps1Q8C196 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Cps1Q8C196 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cps1Q8C196 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cps1Q8C196 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cps1Q8C196 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cps1Q8C196 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms