Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Gm15427-201ENSMUST00000117288 531 ntBASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Thap2-203ENSMUST00000218989 527 ntBASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3rf2Q8BZT2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf2Q8BZT2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh3rf2Q8BZT2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh3rf2Q8BZT2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sh3rf2Q8BZT2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Sh3rf2Q8BZT2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Gm12008-201ENSMUST00000117791 755 ntBASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Sh3rf2Q8BZT2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Gm27494-201ENSMUST00000184735 189 ntBASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms