Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm5049-201ENSMUST00000195878 1590 ntBASIC21.67■■□□□ 1.06
Usp47Q8BY87 Gm6226-201ENSMUST00000117765 1146 ntBASIC21.67■■□□□ 1.06
Usp47Q8BY87 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp47Q8BY87 Gm20553-201ENSMUST00000204205 844 ntBASIC21.67■■□□□ 1.06
Usp47Q8BY87 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Usp47Q8BY87 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp47Q8BY87 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp47Q8BY87 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp47Q8BY87 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC21.67■■□□□ 1.06
Usp47Q8BY87 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Usp47Q8BY87 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC21.67■■□□□ 1.06
Usp47Q8BY87 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Usp47Q8BY87 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp47Q8BY87 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Gm6736-201ENSMUST00000166583 948 ntBASIC21.66■■□□□ 1.06
Usp47Q8BY87 Rpph1-201ENSMUST00000175096 319 ntBASIC21.66■■□□□ 1.06
Usp47Q8BY87 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC21.66■■□□□ 1.06
Usp47Q8BY87 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Usp47Q8BY87 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp47Q8BY87 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Chchd1-203ENSMUST00000224633 557 ntBASIC21.65■■□□□ 1.06
Usp47Q8BY87 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp47Q8BY87 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Usp47Q8BY87 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Usp47Q8BY87 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC21.64■■□□□ 1.06
Usp47Q8BY87 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
Usp47Q8BY87 AC164567.1-201ENSMUST00000219185 960 ntBASIC21.64■■□□□ 1.06
Usp47Q8BY87 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC21.64■■□□□ 1.06
Usp47Q8BY87 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC21.64■■□□□ 1.06
Usp47Q8BY87 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Usp47Q8BY87 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp47Q8BY87 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp47Q8BY87 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Usp47Q8BY87 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Usp47Q8BY87 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Usp47Q8BY87 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC21.64■■□□□ 1.05
Usp47Q8BY87 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp47Q8BY87 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Usp47Q8BY87 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Celf4-206ENSMUST00000224553 1729 ntBASIC21.63■■□□□ 1.05
Usp47Q8BY87 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp47Q8BY87 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Gm2272-201ENSMUST00000194903 582 ntBASIC21.62■■□□□ 1.05
Usp47Q8BY87 AC155252.2-201ENSMUST00000226946 680 ntBASIC21.62■■□□□ 1.05
Usp47Q8BY87 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC21.62■■□□□ 1.05
Usp47Q8BY87 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms