Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trerf1Q8BXJ2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trerf1Q8BXJ2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trerf1Q8BXJ2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trerf1Q8BXJ2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trerf1Q8BXJ2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trerf1Q8BXJ2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trerf1Q8BXJ2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Gm15165-201ENSMUST00000118140 502 ntBASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Mir6404-201ENSMUST00000183699 94 ntBASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Sybu-209ENSMUST00000228639 4113 ntBASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trerf1Q8BXJ2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Gm27459-201ENSMUST00000184860 107 ntBASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trerf1Q8BXJ2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trerf1Q8BXJ2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trerf1Q8BXJ2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trerf1Q8BXJ2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trerf1Q8BXJ2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trerf1Q8BXJ2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms