Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Gm10154-201ENSMUST00000084445 354 ntBASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Gm11745-201ENSMUST00000121669 448 ntBASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scfd1Q8BRF7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Scfd1Q8BRF7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scfd1Q8BRF7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Rprl2-201ENSMUST00000157150 290 ntBASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.52■□□□□ 0.4
Scfd1Q8BRF7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.52■□□□□ 0.39
Scfd1Q8BRF7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms