Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col16a1Q8BLX7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Gm15593-201ENSMUST00000122085 1008 ntBASIC20■□□□□ 0.79
Col16a1Q8BLX7 AL593843.1-201ENSMUST00000195891 145 ntBASIC20■□□□□ 0.79
Col16a1Q8BLX7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Gm42466-201ENSMUST00000202099 1301 ntBASIC20■□□□□ 0.79
Col16a1Q8BLX7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Gm6539-201ENSMUST00000119157 1064 ntBASIC20■□□□□ 0.79
Col16a1Q8BLX7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC20■□□□□ 0.79
Col16a1Q8BLX7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC20■□□□□ 0.79
Col16a1Q8BLX7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col16a1Q8BLX7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Gm6263-201ENSMUST00000120029 1342 ntBASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Gm29667-201ENSMUST00000190817 490 ntBASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col16a1Q8BLX7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col16a1Q8BLX7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Gm22189-201ENSMUST00000103822 86 ntBASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Gm14928-201ENSMUST00000120198 477 ntBASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col16a1Q8BLX7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Gm12859-201ENSMUST00000117834 427 ntBASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Celf4-206ENSMUST00000224553 1729 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms