Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm22065-201ENSMUST00000103753 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm22066-201ENSMUST00000103761 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm24932-201ENSMUST00000103763 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm24115-201ENSMUST00000103799 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm22190-201ENSMUST00000103827 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm22191-201ENSMUST00000103831 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm25287-201ENSMUST00000103846 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm24721-201ENSMUST00000103849 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm22918-201ENSMUST00000103855 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm28018-201ENSMUST00000103869 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm26399-201ENSMUST00000103937 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm9385-201ENSMUST00000117563 472 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm25349-201ENSMUST00000177728 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm23616-201ENSMUST00000177797 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm25871-201ENSMUST00000177816 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm24752-201ENSMUST00000178240 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm24496-201ENSMUST00000178287 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm25649-201ENSMUST00000178476 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm25548-201ENSMUST00000178681 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm23147-201ENSMUST00000178841 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm26095-201ENSMUST00000179270 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm22171-201ENSMUST00000179283 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm23936-201ENSMUST00000179354 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm22619-201ENSMUST00000179516 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm25255-201ENSMUST00000179579 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm24755-201ENSMUST00000179691 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm26506-201ENSMUST00000179692 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm25086-201ENSMUST00000179931 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm23243-201ENSMUST00000180047 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm24659-201ENSMUST00000180212 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm24169-201ENSMUST00000180244 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm23689-201ENSMUST00000180354 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm27359-201ENSMUST00000184153 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm27785-201ENSMUST00000184268 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm27466-201ENSMUST00000184396 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm27703-201ENSMUST00000184836 110 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Smarcal1Q8BJL0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Mir449b-201ENSMUST00000104833 80 ntBASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Mir7023-201ENSMUST00000185093 64 ntBASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcal1Q8BJL0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Gm10154-201ENSMUST00000084445 354 ntBASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcal1Q8BJL0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms