Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SynbQ8BI41 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SynbQ8BI41 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SynbQ8BI41 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.73□□□□□ -0.05
SynbQ8BI41 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SynbQ8BI41 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.73□□□□□ -0.05
SynbQ8BI41 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.73□□□□□ -0.05
SynbQ8BI41 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.73□□□□□ -0.05
SynbQ8BI41 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.73□□□□□ -0.05
SynbQ8BI41 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SynbQ8BI41 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SynbQ8BI41 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.72□□□□□ -0.05
SynbQ8BI41 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.72□□□□□ -0.05
SynbQ8BI41 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SynbQ8BI41 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.72□□□□□ -0.05
SynbQ8BI41 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.72□□□□□ -0.05
SynbQ8BI41 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SynbQ8BI41 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Gm10175-201ENSMUST00000086013 645 ntBASIC14.72□□□□□ -0.05
SynbQ8BI41 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.72□□□□□ -0.05
SynbQ8BI41 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
SynbQ8BI41 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SynbQ8BI41 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.71□□□□□ -0.05
SynbQ8BI41 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.71□□□□□ -0.05
SynbQ8BI41 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SynbQ8BI41 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SynbQ8BI41 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
SynbQ8BI41 Gm11764-201ENSMUST00000120221 623 ntBASIC14.71□□□□□ -0.05
SynbQ8BI41 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.71□□□□□ -0.05
SynbQ8BI41 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.71□□□□□ -0.05
SynbQ8BI41 Mir8117-201ENSMUST00000184773 107 ntBASIC14.71□□□□□ -0.05
SynbQ8BI41 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SynbQ8BI41 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SynbQ8BI41 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SynbQ8BI41 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SynbQ8BI41 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.71□□□□□ -0.05
SynbQ8BI41 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SynbQ8BI41 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
SynbQ8BI41 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SynbQ8BI41 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SynbQ8BI41 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SynbQ8BI41 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SynbQ8BI41 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SynbQ8BI41 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SynbQ8BI41 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SynbQ8BI41 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SynbQ8BI41 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SynbQ8BI41 Prob1-201ENSMUST00000097619 3021 ntBASIC14.7□□□□□ -0.06
SynbQ8BI41 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SynbQ8BI41 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SynbQ8BI41 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SynbQ8BI41 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms