Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf38Q8BI21 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Olfr129-201ENSMUST00000122318 993 ntBASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Gm25406-201ENSMUST00000157599 105 ntBASIC14.9□□□□□ -0.02
Rnf38Q8BI21 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf38Q8BI21 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.89□□□□□ -0.03
Rnf38Q8BI21 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Gm33142-201ENSMUST00000193913 867 ntBASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf38Q8BI21 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf38Q8BI21 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.87□□□□□ -0.03
Rnf38Q8BI21 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf38Q8BI21 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms