Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.77■□□□□ 0.27
Depdc1bQ8BH88 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Depdc1bQ8BH88 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Depdc1bQ8BH88 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Depdc1bQ8BH88 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm8825-201ENSMUST00000182565 998 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm4518-201ENSMUST00000182638 718 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Depdc1bQ8BH88 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Gm9172-201ENSMUST00000212092 954 ntBASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Depdc1bQ8BH88 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Depdc1bQ8BH88 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms