Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Psmb5-202ENSMUST00000227257 622 ntBASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4dQ8BGV9 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Gm27300-201ENSMUST00000184085 97 ntBASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Gm27335-201ENSMUST00000184758 97 ntBASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.34□□□□□ -0.11
Atg4dQ8BGV9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atg4dQ8BGV9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atg4dQ8BGV9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atg4dQ8BGV9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4dQ8BGV9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 BC037039-201ENSMUST00000192003 2205 ntBASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Gm14140-201ENSMUST00000119999 995 ntBASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms