Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc116Q80X53 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Gm8097-201ENSMUST00000117903 829 ntBASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Gm14722-201ENSMUST00000118943 689 ntBASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Gm12644-201ENSMUST00000119935 606 ntBASIC15.11■□□□□ 0.01
Ccdc116Q80X53 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Gm18669-201ENSMUST00000216049 778 ntBASIC15.11■□□□□ 0.01
Ccdc116Q80X53 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc116Q80X53 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc116Q80X53 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Gm8344-201ENSMUST00000119813 856 ntBASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Gm8655-201ENSMUST00000221159 852 ntBASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc116Q80X53 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms